Transcript: lnc-RNFT2-1:8

Basic information

LNCipedia transcript ID: lnc-RNFT2-1:8 
LNCipedia gene ID: lnc-RNFT2-1
Location (hg38): chr12:116664065-116675926
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 351 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020585; NONHSAT030959
Alternative gene names: XLOC_009899; linc-RNFT2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -397.3724 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNFT2-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNFT2-3:1
3.1 lnc-RNFT2-3:1
4.0 lnc-RNFT2-3:1
4.1 lnc-RNFT2-1:8
5.0 lnc-RNFT2-1:8
5.1 lnc-MAP1LC3B2-1:11
5.2 lnc-RNFT2-1:8