Transcript: lnc-ROBO3-2:4

Basic information

LNCipedia transcript ID: lnc-ROBO3-2:4 
LNCipedia gene ID: lnc-ROBO3-2
RefSeq ID: NR_103862
Location (hg38): chr11:124800428-124834487
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2908 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT024902; NR_103862; NR_103862.1
Alternative gene names: LOC100507283


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.2788 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ROBO3-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ROBO3-2:4
4.0 lnc-ROBO3-2:4
4.1 lnc-ROBO3-2:4
5.0 lnc-ROBO3-2:4
5.1 lnc-HINFP-76:4
5.2 lnc-ROBO3-2:4