Transcript: lnc-ROBO3-2:7

Basic information

LNCipedia transcript ID: lnc-ROBO3-2:7 
LNCipedia gene ID: lnc-ROBO3-2
Location (hg38): chr11:124800671-124805568
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 818 bp
Exons: 4
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA258:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.2788 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ROBO3-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ROBO3-2:7
4.1 lnc-ROBO3-2:7
5.0 lnc-ROBO3-2:7
5.1 lnc-HINFP-76:13
5.2 lnc-ROBO3-2:7