Transcript: lnc-ROPN1B-7:4

Basic information

LNCipedia transcript ID: lnc-ROPN1B-7:4 
LNCipedia gene ID: lnc-ROPN1B-7
Location (hg38): chr3:125916624-125928595
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 988 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT091633
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 578.8258 coding 
CPAT coding probability 88.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ROPN1B-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ROPN1B-7:4
4.0 lnc-ROPN1B-7:4
4.1 lnc-ROPN1B-7:4
5.0 lnc-ROPN1B-7:4
5.1 lnc-CFAP100-16:4
5.2 lnc-ROPN1B-7:4