Transcript: lnc-ROPN1L-13:1

Basic information

LNCipedia transcript ID: lnc-ROPN1L-13:1 
LNCipedia gene ID: lnc-ROPN1L-13
Location (hg38): chr5:10619292-10620629
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1064 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT100463
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.7426 non-coding 
CPAT coding probability 4.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ROPN1L-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ROPN1L-13:1
4.0 lnc-ROPN1L-13:1
4.1 lnc-ROPN1L-13:1
5.0 lnc-ROPN1L-13:1
5.1 lnc-CARD6-248:1
5.2 lnc-ROPN1L-13:1