Transcript: lnc-ROPN1L-5:1

Basic information

LNCipedia transcript ID: lnc-ROPN1L-5:1 
LNCipedia gene ID: lnc-ROPN1L-5
Location (hg38): chr5:10488820-10489142
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 323 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT100446
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.4335 non-coding 
CPAT coding probability 13.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ROPN1L-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ROPN1L-5:1
4.0 lnc-ROPN1L-5:1
4.1 lnc-ROPN1L-5:1
5.0 lnc-ROPN1L-5:1
5.1 lnc-CARD6-256:1
5.2 lnc-ROPN1L-5:1