Transcript: lnc-ROR1-1:3

Basic information

LNCipedia transcript ID: lnc-ROR1-1:3 
LNCipedia gene ID: lnc-ROR1-1
Ensembl Gene ID: ENSG00000284928
Ensembl Transcript ID: ENST00000646967
Location (hg38): chr1:64186791-64192685
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1031 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646967.1
Alternative gene names: ENSG00000284928.1; AL445205.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.7351 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ROR1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-UBE2U-1:2
5.1 lnc-UBE2U-1:2
5.2 lnc-ROR1-1:3