Transcript: lnc-RPA3-2:2

Basic information

LNCipedia transcript ID: lnc-RPA3-2:2 
LNCipedia gene ID: lnc-RPA3-2
Location (hg38): chr7:7742091-7742535
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 445 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT119134
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 63.3753 coding 
CPAT coding probability 85.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPA3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPA3-2:2
4.0 lnc-RPA3-2:2
4.1 lnc-RPA3-2:2
5.0 lnc-RPA3-2:2
5.1 lnc-RNF216-37:4
5.2 lnc-RPA3-2:2