Transcript: lnc-RPE65-4:3

Basic information

LNCipedia transcript ID: lnc-RPE65-4:3 
LNCipedia gene ID: lnc-RPE65-4
Location (hg38): chr1:68366091-68384254
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1419 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000061804.1|ENCT00000027089.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.6527 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPE65-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPE65-4:3
5.0 lnc-RPE65-4:3
5.1 lnc-SERBP1-9:3
5.2 lnc-RPE65-4:3