Transcript: lnc-RPL11-1:6

Basic information

LNCipedia transcript ID: lnc-RPL11-1:6 
LNCipedia gene ID: lnc-RPL11-1
Location (hg38): chr1:23581647-23592667
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 218 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000866; NONHSAT139851
Alternative gene names: XLOC_000094; linc-RPL11-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -219.7711 non-coding 
CPAT coding probability 5.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL11-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPL11-1:1
3.1 lnc-RPL11-1:1
4.0 lnc-MDS2-1:4
4.1 lnc-MDS2-1:4
5.0 lnc-MDS2-1:4
5.1 lnc-ELOA-9:2
5.2 lnc-RPL11-1:6