Transcript: lnc-RPL11-1:7

Basic information

LNCipedia transcript ID: lnc-RPL11-1:7 
LNCipedia gene ID: lnc-RPL11-1
RefSeq ID: NR_027042
Location (hg38): chr1:23627334-23640566
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1027 bp
Exons: 7
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027042; NR_027042.1
Alternative gene names: MDS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.0512 non-coding 
CPAT coding probability 26.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL11-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL11-1:3
4.0 lnc-MDS2-1:5
4.1 lnc-MDS2-1:5
5.0 lnc-MDS2-1:5
5.1 lnc-ELOA-9:3
5.2 lnc-RPL11-1:7