Transcript: lnc-RPL11-1:8

Basic information

LNCipedia transcript ID: lnc-RPL11-1:8 
LNCipedia gene ID: lnc-RPL11-1
Ensembl Gene ID: ENSG00000197880
Ensembl Transcript ID: ENST00000374555
Location (hg38): chr1:23627334-23640568
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1029 bp
Exons: 7
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000374555.7
Alternative gene names: ENSG00000197880.8; MDS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.0512 non-coding 
CPAT coding probability 14.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL11-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ELOA-9:4
5.1 lnc-ELOA-9:4
5.2 lnc-RPL11-1:8