Transcript: lnc-RPL11-1:9

Basic information

LNCipedia transcript ID: lnc-RPL11-1:9 
LNCipedia gene ID: lnc-RPL11-1
Location (hg38): chr1:23627401-23640551
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 398 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT001537
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.9104 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL11-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL11-1:4
4.0 lnc-MDS2-1:6
4.1 lnc-MDS2-1:6
5.0 lnc-MDS2-1:6
5.1 lnc-ELOA-9:5
5.2 lnc-RPL11-1:9