Transcript: lnc-RPP30-12:4

Basic information

LNCipedia transcript ID: lnc-RPP30-12:4 
LNCipedia gene ID: lnc-RPP30-12
Location (hg38): chr10:90413440-90425823
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 559 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000115971.1|MICT00000046026.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.6936 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPP30-12:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPP30-12:4
5.0 lnc-RPP30-12:4
5.1 lnc-SMC3-275:3
5.2 lnc-RPP30-12:4