Transcript: lnc-RPRML-3:20

Basic information

LNCipedia transcript ID: lnc-RPRML-3:20 
LNCipedia gene ID: lnc-RPRML-3
Location (hg38): chr17:46982789-47067511
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2291 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT054232
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.4765 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPRML-3:20 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPRML-3:20
4.0 lnc-RPRML-3:20
4.1 lnc-RPRML-3:20
5.0 lnc-RPRML-3:20
5.1 lnc-GFAP-56:14
5.2 lnc-RPRML-3:20