Transcript: lnc-RPS15-1:1

Basic information

LNCipedia transcript ID: lnc-RPS15-1:1 
LNCipedia gene ID: lnc-RPS15-1
Ensembl Gene ID: ENSG00000268798
Ensembl Transcript ID: ENST00000594262
Location (hg38): chr19:1440839-1441938
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1100 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000594262.1
Alternative gene names: ENSG00000268798.1; CTB-25B13.5; AC027307.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 44.3856 non-coding 
CPAT coding probability 10.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS15-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RPS15-1:1
4.1 lnc-RPS15-1:1
5.0 lnc-RPS15-1:1
5.1 lnc-RPL36-128:1
5.2 lnc-RPS15-1:1