Transcript: lnc-RPS24-2:4

Basic information

LNCipedia transcript ID: lnc-RPS24-2:4 
LNCipedia gene ID: lnc-RPS24-2
Ensembl Gene ID: ENSG00000228748
Ensembl Transcript ID: ENST00000601701
Location (hg38): chr10:77790661-77791647
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 987 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT015008; ENST00000601701.1
Alternative gene names: ENSG00000228748.2; RP13-39P12.3; AL450306.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.5994 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS24-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL391421.1-2:4
4.0 lnc-AL391421.1-2:4
4.1 lnc-AL391421.1-2:4
5.0 lnc-AL391421.1-2:4
5.1 lnc-MTRNR2L5-219:4
5.2 lnc-RPS24-2:4