Transcript: lnc-RPS24-3:29

Basic information

LNCipedia transcript ID: lnc-RPS24-3:29 
LNCipedia gene ID: lnc-RPS24-3
Ensembl Gene ID: ENSG00000230417
Ensembl Transcript ID: ENST00000634933
Location (hg38): chr10:78301194-78330708
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1544 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634933.1
Alternative gene names: ENSG00000230417.11; LINC00856; LINC00595


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -133.9763 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS24-3:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RPS24-3:29
4.1 lnc-RPS24-3:29
5.0 lnc-RPS24-3:29
5.1 lnc-MTRNR2L5-236:36
5.2 lnc-RPS24-3:29