Transcript: lnc-RPS4Y1-13:1

Basic information

LNCipedia transcript ID: lnc-RPS4Y1-13:1 
LNCipedia gene ID: lnc-RPS4Y1-13
Location (hg38): chrY:1268800-1309935
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1717 bp
Exons: 12
Sources: NONCODE v4
Alternative transcript names: NONHSAT139265; NR_027760
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 855.0234 coding 
CPAT coding probability 98.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS4Y1-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS4Y1-13:1
4.0 lnc-RPS4Y1-13:1
4.1 lnc-RPS4Y1-13:1
5.0 lnc-RPS4Y1-13:1
5.1 lnc-TGIF2LY-17:1
5.2 lnc-RPS4Y1-13:1