Transcript: lnc-RPS4Y1-2:6

Basic information

LNCipedia transcript ID: lnc-RPS4Y1-2:6 
LNCipedia gene ID: lnc-RPS4Y1-2
Location (hg38): chrY:2618732-2638694
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 958 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT139286
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.5249 non-coding 
CPAT coding probability 3.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS4Y1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS4Y1-2:6
4.0 lnc-RPS4Y1-2:6
4.1 lnc-RPS4Y1-2:6
5.0 lnc-RPS4Y1-2:6
5.1 lnc-TGIF2LY-7:6
5.2 lnc-RPS4Y1-2:6