Transcript: lnc-RPS5-4:3

Basic information

LNCipedia transcript ID: lnc-RPS5-4:3 
LNCipedia gene ID: lnc-RPS5-4
RefSeq ID: NR_136527
Location (hg38): chr19:58362626-58366578
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 736 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136527.1
Alternative gene names: LOC105372483


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.4195 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS5-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ZNF587B-40:3
5.1 lnc-ZNF587B-40:3
5.2 lnc-RPS5-4:3