Transcript: lnc-RPS6KA3-1:1

Basic information

LNCipedia transcript ID: lnc-RPS6KA3-1:1 
LNCipedia gene ID: lnc-RPS6KA3-1
Location (hg38): chrX:20311843-20318082
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 926 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017300; NONHSAT136453
Alternative gene names: XLOC_008127; linc-RPS6KA3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.8503 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS6KA3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPS6KA3-1:1
3.1 lnc-RPS6KA3-1:1
4.0 lnc-RPS6KA3-1:1
4.1 lnc-RPS6KA3-1:1
5.0 lnc-RPS6KA3-1:1
5.1 lnc-PCSK1N-144:1
5.2 lnc-RPS6KA3-1:1