Transcript: lnc-RPS6KA4-3:2

Basic information

LNCipedia transcript ID: lnc-RPS6KA4-3:2 
LNCipedia gene ID: lnc-RPS6KA4-3
RefSeq ID: NR_073177
Location (hg38): chr11:64449057-64451657
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2357 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_073177.1
Alternative gene names: LOC100996455


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.053 non-coding 
CPAT coding probability 53.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS6KA4-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PPP2R5B-34:2
5.1 lnc-PPP2R5B-34:2
5.2 lnc-RPS6KA4-3:2