Transcript: lnc-RPS6KA6-6:1

Basic information

LNCipedia transcript ID: lnc-RPS6KA6-6:1 
LNCipedia gene ID: lnc-RPS6KA6-6
Location (hg38): chrX:83506023-83509214
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3192 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000607095.1
Alternative gene names: ENSG00000272066.1; RP3-326L13.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 422.2048 coding 
CPAT coding probability 95.09% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS6KA6-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS6KA6-6:1
4.0 lnc-RPS6KA6-6:1
4.1 lnc-RPS6KA6-6:1
5.0 lnc-RPS6KA6-6:1
5.1 lnc-PHKA1-47:1
5.2 lnc-RPS6KA6-6:1