Transcript: lnc-RPS6KB1-1:7

Basic information

LNCipedia transcript ID: lnc-RPS6KB1-1:7 
LNCipedia gene ID: lnc-RPS6KB1-1
Location (hg38): chr17:59965088-59973793
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1060 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267302.1|HBMT00000606381.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.4803 non-coding 
CPAT coding probability 18.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS6KB1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPS6KB1-1:7
5.0 lnc-RPS6KB1-1:7
5.1 lnc-VMP1-38:2
5.2 lnc-RPS6KB1-1:7