Transcript: lnc-RRAGC-10:2

Basic information

LNCipedia transcript ID: lnc-RRAGC-10:2 
LNCipedia gene ID: lnc-RRAGC-10
Ensembl Gene ID: ENSG00000284632
Ensembl Transcript ID: ENST00000641963
Location (hg38): chr1:38781167-38804085
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 514 bp
Exons: 3
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641963.1
Alternative gene names: ENSG00000284632.1; AL354702.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -480.7697 non-coding 
CPAT coding probability 16.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RRAGC-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PABPC4-10:2
5.1 lnc-PABPC4-10:2
5.2 lnc-RRAGC-10:2