Transcript: lnc-RRN3-3:6

Basic information

LNCipedia transcript ID: lnc-RRN3-3:6 
LNCipedia gene ID: lnc-RRN3-3
Location (hg38): chr16:15130039-15131273
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 485 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT140739
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.3369 non-coding 
CPAT coding probability 50.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RRN3-3:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RRN3-3:2
4.0 lnc-NPIPP1-3:2
4.1 lnc-NPIPP1-3:2
5.0 lnc-NPIPP1-3:2
5.1 lnc-MARF1-9:2
5.2 lnc-RRN3-3:6