Transcript: lnc-RTL1-11:1

Basic information

LNCipedia transcript ID: lnc-RTL1-11:1 
LNCipedia gene ID: lnc-RTL1-11
Location (hg38): chr14:100850500-100850931
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT039778; FPKM1_group_9579_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.0253 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTL1-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTL1-11:1
4.0 lnc-RTL1-11:1
4.1 lnc-RTL1-11:1
5.0 lnc-RTL1-11:1
5.1 lnc-HSP90AA1-30:1
5.2 lnc-RTL1-11:1