Transcript: lnc-RTL6-2:2

Basic information

LNCipedia transcript ID: lnc-RTL6-2:2 
LNCipedia gene ID: lnc-RTL6-2
Location (hg38): chr22:44661612-44667824
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 401 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029709; NONHSAT087179
Alternative gene names: XLOC_014393; linc-LDOC1L-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -277.3128 non-coding 
CPAT coding probability 10.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTL6-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LDOC1L-2:1
3.1 lnc-LDOC1L-2:1
4.0 lnc-LDOC1L-2:1
4.1 lnc-LDOC1L-2:1
5.0 lnc-LDOC1L-2:1
5.1 lnc-WNT7B-15:2
5.2 lnc-RTL6-2:2