Transcript: lnc-RTL6-8:3

Basic information

LNCipedia transcript ID: lnc-RTL6-8:3 
LNCipedia gene ID: lnc-RTL6-8
Location (hg38): chr22:44418946-44423274
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2568 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003bgp_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.7302 non-coding 
CPAT coding probability 7.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTL6-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LDOC1L-8:2
4.0 lnc-LDOC1L-8:2
4.1 lnc-LDOC1L-8:2
5.0 lnc-LDOC1L-8:2
5.1 lnc-WNT7B-21:3
5.2 lnc-RTL6-8:3