Transcript: lnc-RTP4-7:2

Basic information

LNCipedia transcript ID: lnc-RTP4-7:2 
LNCipedia gene ID: lnc-RTP4-7
Location (hg38): chr3:187745818-187750878
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5061 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223401.1|ENCT00000298514.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.2793 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTP4-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-211G3.3.1-6:2
5.0 lnc-RP11-211G3.3.1-6:2
5.1 lnc-FAM131A-53:2
5.2 lnc-RTP4-7:2