Transcript: lnc-RTP5-1:3

Basic information

LNCipedia transcript ID: lnc-RTP5-1:3 
LNCipedia gene ID: lnc-RTP5-1
Location (hg38): chr2:241844089-241846517
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2306 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT077995
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.9923 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTP5-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXXC11-1:2
4.0 lnc-CXXC11-1:2
4.1 lnc-CXXC11-1:2
5.0 lnc-CXXC11-1:2
5.1 lnc-RTP5-1:1
5.2 lnc-RTP5-1:3