Transcript: lnc-RTP5-6:2

Basic information

LNCipedia transcript ID: lnc-RTP5-6:2 
LNCipedia gene ID: lnc-RTP5-6
Location (hg38): chr2:241902553-241908179
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5627 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT078005
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 118.3484 coding 
CPAT coding probability 38.90% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RTP5-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXXC11-6:1
4.0 lnc-CXXC11-6:1
4.1 lnc-CXXC11-6:1
5.0 lnc-CXXC11-6:1
5.1 lnc-RTP5-6:1
5.2 lnc-RTP5-6:2