Transcript: lnc-RTP5-8:17

Basic information

LNCipedia transcript ID: lnc-RTP5-8:17 
LNCipedia gene ID: lnc-RTP5-8
Location (hg38): chr2:242122287-242138870
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 256 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT078040
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.1234 non-coding 
CPAT coding probability 17.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTP5-8:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXXC11-8:7
4.0 lnc-CXXC11-8:7
4.1 lnc-CXXC11-8:7
5.0 lnc-CXXC11-8:7
5.1 lnc-RTP5-8:9
5.2 lnc-RTP5-8:17