Transcript: lnc-RTTN-2:1

Basic information

LNCipedia transcript ID: lnc-RTTN-2:1 
LNCipedia gene ID: lnc-RTTN-2
Location (hg38): chr18:70337326-70337679
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 206 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026726; NONHSAT059773
Alternative gene names: XLOC_012871; linc-RTTN-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -549.0473 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTTN-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RTTN-2:1
3.1 lnc-RTTN-2:1
4.0 lnc-RTTN-2:1
4.1 lnc-RTTN-2:1
5.0 lnc-RTTN-2:1
5.1 lnc-PQLC1-81:1
5.2 lnc-RTTN-2:1