Transcript: lnc-RUBCNL-3:2

Basic information

LNCipedia transcript ID: lnc-RUBCNL-3:2 
LNCipedia gene ID: lnc-RUBCNL-3
Location (hg38): chr13:46278455-46279805
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 303 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT033637; FPKM1_group_7813_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.6524 non-coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RUBCNL-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0226L-3:2
4.0 lnc-KIAA0226L-3:2
4.1 lnc-KIAA0226L-3:2
5.0 lnc-KIAA0226L-3:2
5.1 lnc-CCDC169-117:2
5.2 lnc-RUBCNL-3:2