Transcript: lnc-RUNX1-12:4

Basic information

LNCipedia transcript ID: lnc-RUNX1-12:4 
LNCipedia gene ID: lnc-RUNX1-12
Location (hg38): chr21:35654826-35864462
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 228 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT081915
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0599 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RUNX1-12:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SETD4-12:4
4.0 lnc-RUNX1-12:4
4.1 lnc-RUNX1-12:4
5.0 lnc-RUNX1-12:4
5.1 lnc-CRYZL1-25:5
5.2 lnc-RUNX1-12:4