Transcript: lnc-RUNX1-12:9

Basic information

LNCipedia transcript ID: lnc-RUNX1-12:9 
LNCipedia gene ID: lnc-RUNX1-12
RefSeq ID: NR_110418
Location (hg38): chr21:35954660-36004667
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 830 bp
Exons: 6
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110418.1
Alternative gene names: LOC101928269


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.7798 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RUNX1-12:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CRYZL1-25:2
5.1 lnc-CRYZL1-25:2
5.2 lnc-RUNX1-12:9