Transcript: lnc-RUNX1T1-4:2

Basic information

LNCipedia transcript ID: lnc-RUNX1T1-4:2 
LNCipedia gene ID: lnc-RUNX1T1-4
Location (hg38): chr8:92459452-92500900
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1837 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015093; NONHSAT127700
Alternative gene names: XLOC_007155; linc-RUNX1T1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.481 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RUNX1T1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RUNX1T1-3:2
3.1 lnc-RUNX1T1-4:2
4.0 lnc-RUNX1T1-4:2
4.1 lnc-RUNX1T1-4:2
5.0 lnc-RUNX1T1-4:2
5.1 lnc-ZNF706-190:2
5.2 lnc-RUNX1T1-4:2