Transcript: lnc-RWDD2B-1:1

Basic information

LNCipedia transcript ID: lnc-RWDD2B-1:1 
LNCipedia gene ID: lnc-RWDD2B-1
Location (hg38): chr21:29058073-29059656
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 355 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000457162.1; AF129075.5-001; OTTHUMT00000171870.1
Alternative gene names: ENSG00000231125.1; AF129075.5; OTTHUMG00000078807.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.3546 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RWDD2B-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RWDD2B-1:1
4.0 lnc-RWDD2B-1:1
4.1 lnc-RWDD2B-1:1
5.0 lnc-RWDD2B-1:1
5.1 lnc-LTN1-5:2
5.2 lnc-RWDD2B-1:1