Transcript: lnc-RWDD3-7:4

Basic information

LNCipedia transcript ID: lnc-RWDD3-7:4 
LNCipedia gene ID: lnc-RWDD3-7
Location (hg38): chr1:95991996-96022881
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 773 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001053; NONHSAT004690
Alternative gene names: XLOC_000312; linc-PTBP2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.9241 non-coding 
CPAT coding probability 22.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RWDD3-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PTBP2-2:3
3.1 lnc-RWDD3-7:4
4.0 lnc-RWDD3-7:4
4.1 lnc-RWDD3-7:4
5.0 lnc-RWDD3-7:4
5.1 lnc-BTBD8-51:7
5.2 lnc-RWDD3-7:4