Transcript: lnc-RXFP4-2:7

Basic information

LNCipedia transcript ID: lnc-RXFP4-2:7 
LNCipedia gene ID: lnc-RXFP4-2
Location (hg38): chr1:155978684-155982986
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2272 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273002.1|ENST00000610146.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.4376 non-coding 
CPAT coding probability 22.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RXFP4-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RXFP4-2:7
5.0 lnc-RXFP4-2:7
5.1 lnc-RXFP4-2:7
5.2 lnc-RXFP4-2:7