Transcript: lnc-RXRG-1:9

Basic information

LNCipedia transcript ID: lnc-RXRG-1:9 
LNCipedia gene ID: lnc-RXRG-1
Location (hg38): chr1:165500345-165581501
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 457 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT007319
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.2488 non-coding 
CPAT coding probability 11.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RXRG-1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RXRG-1:9
4.0 lnc-RXRG-1:9
4.1 lnc-RXRG-1:9
5.0 lnc-RXRG-1:9
5.1 lnc-SH2D1B-43:6
5.2 lnc-RXRG-1:9