Transcript: lnc-S100G-1:6

Basic information

LNCipedia transcript ID: lnc-S100G-1:6 
LNCipedia gene ID: lnc-S100G-1
Location (hg38): chrX:16576403-16587274
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5797 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000110530.1|ENCT00000464890.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.8253 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-S100G-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-S100G-1:6
5.0 lnc-S100G-1:6
5.1 lnc-GK-111:3
5.2 lnc-S100G-1:6