Transcript: lnc-SAMD8-1:2

Basic information

LNCipedia transcript ID: lnc-SAMD8-1:2 
LNCipedia gene ID: lnc-SAMD8-1
RefSeq ID: NR_134476
Location (hg38): chr10:74912786-74936402
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2306 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134476.1
Alternative gene names: LOC101929165


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.1827 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SAMD8-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MTRNR2L5-195:2
5.1 lnc-MTRNR2L5-195:2
5.2 lnc-SAMD8-1:2