Transcript: lnc-SATB1-8:7

Basic information

LNCipedia transcript ID: lnc-SATB1-8:7 
LNCipedia gene ID: lnc-SATB1-8
Location (hg38): chr3:17406418-17742564
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 672 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT088545
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.6634 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SATB1-8:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SATB1-8:7
4.0 lnc-SATB1-8:7
4.1 lnc-SATB1-8:7
5.0 lnc-SATB1-8:7
5.1 lnc-SH3BP5-46:7
5.2 lnc-SATB1-8:7