Transcript: lnc-SBNO1-1:1

Basic information

LNCipedia transcript ID: lnc-SBNO1-1:1 
LNCipedia gene ID: lnc-SBNO1-1
Location (hg38): chr12:123289109-123289683
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 575 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT031577; ENST00000602688.1
Alternative gene names: ENSG00000270113.1; RP11-282O18.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.5448 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SBNO1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SBNO1-1:1
4.0 lnc-SBNO1-1:1
4.1 lnc-SBNO1-1:1
5.0 lnc-SBNO1-1:1
5.1 lnc-SBNO1-1:1
5.2 lnc-SBNO1-1:1