Transcript: lnc-SCARB2-2:10

Basic information

LNCipedia transcript ID: lnc-SCARB2-2:10 
LNCipedia gene ID: lnc-SCARB2-2
Location (hg38): chr4:76144149-76145820
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 494 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT096986
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -146.644 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCARB2-2:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SCARB2-2:10
4.0 lnc-SCARB2-2:10
4.1 lnc-SCARB2-2:10
5.0 lnc-SCARB2-2:10
5.1 lnc-CXCL11-6:7
5.2 lnc-SCARB2-2:10