Transcript: lnc-SCGB2B2-130:1

Basic information

LNCipedia transcript ID: lnc-SCGB2B2-130:1 
LNCipedia gene ID: lnc-SCGB2B2-130
Location (hg38): chr19:34421612-34428318
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4987 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267024.1|MICT00000173227.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.7634 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCGB2B2-130:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SCGB2B2-8:2
5.0 lnc-SCGB2B2-8:2
5.1 lnc-SCGB2B2-16:1
5.2 lnc-SCGB2B2-130:1