Transcript: lnc-SCGB2B2-130:3

Basic information

LNCipedia transcript ID: lnc-SCGB2B2-130:3 
LNCipedia gene ID: lnc-SCGB2B2-130
Location (hg38): chr19:34426112-34428318
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 487 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267024.1|ENST00000592220.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -350.2361 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCGB2B2-130:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SCGB2B2-8:4
5.0 lnc-SCGB2B2-8:4
5.1 lnc-SCGB2B2-16:3
5.2 lnc-SCGB2B2-130:3